Publications IPMB

ZORA Publication List

Publications

• 2026

  • Neto Silva Rosa Mendes Tavares, I. (2026). Structural and Functional Analysis of Antimicrobial Secondary Metabolites and their Association with Membrane Vesicles (Dissertation, University of Zurich) https://doi.org/10.5167/uzh-434096
  • Jordan, S. (2026). Comparative Genomics of $\textit{Enterobacter}$ spp. Associated with Bulb Decay of Onions (Dissertation, University of Zurich) https://doi.org/10.5167/uzh-433779
  • Serra Moncadas, L., Shakurova, A., Hofer, C., & Andrei, A.-S. (2026). Deep-branching Chloroflexota lineages illuminate the eco-evolutionary foundation of cross-ecosystem colonization Nature Communications, 17, 4696. https://doi.org/10.1038/s41467-026-71228-y
  • Barmettler, E., Hartman, K., Valzano-Held, A., Egli-Künzler, L. S., Dubuis, P.-H., Mackie, K., Bucheli, T. D., Lutz, S., & Van Der Heijden, M. (2026). Copper and synthetic pesticides are major drivers of soil bacterial and fungal communities Journal of Hazardous Materials, 507, 141682. https://doi.org/10.1016/j.jhazmat.2026.141682
  • Plüss, A. J. (2026). Epiallele Diversity across Space and Time in Natural Populations of $\textit{Arabidopsis thaliana}$ (Dissertation, University of Zurich) https://doi.org/10.5167/uzh-292973
  • Heuberger, M. E. (2026). Transposable Elements as Drivers of Eukaryotic Genome Evolution (Dissertation, University of Zurich) https://doi.org/10.5167/uzh-292956
  • Collotta, G., Gatti, M., Ungureanu, I.-M., van Ackeren, V., Rannou, E., Vivalda, F., Gomez Vieito, D., Fishwick, K. M., von Aesch, C., Porro, A., Ungerleider, K., Heidari, A., Guérois, R., Harding, R. J., Bischof, S., Balmus, G., & Sartori, A. A. (2026). USP7 deubiquitinase stabilizes FAN1 to support DNA crosslink repair and suppress CAG repeat expansion Nature Communications, 17, 3551. https://doi.org/10.1038/s41467-026-70051-9
  • Toth, R., Choi, S., Le Naour--Vernet, M., Schwanke, F., Johnson, J. L., Tee, E. E., Yaron-Barir, T. M., Khochaba, E., Derbyshire, P., Colo, A., Köster, P., Huntsman, E. M., Herold, L., Lee, Y., Fernández-Fernández, Á. D., Ahn, H.-K., Dindas, J., Bjornson, M., Rhodes, J., … et al. (2026). Motif-based substrate mapping of the receptor-like cytoplasmic kinase BIK1 reveals novel components and regulatory nodes of plant immunity Nature Plants, 12, 465–480. https://doi.org/10.1038/s41477-025-02218-z
  • Kracik-Dyer, E. G. (2026). Super-Resolution Imaging of Nanoscale Chromatin Dynamics in $\textit{Arabidopsis thaliana}$ (Dissertation, University of Zurich) https://doi.org/10.5167/uzh-283343
  • Song, B., Choi, S., Kong, L., Kim, S.-I., Fliegmann, J., Li, X., Gao, Y., DeFalco, T. A., Hu, M., Li, M., Zhao, Y., Wang, H., Ma, S., Shan, L., Nürnberger, T., He, P., Zipfel, C., & Zhou, J.-M. (2026). New alleles of Arabidopsis BIK1 reinforce its predominant role in pattern-triggered immunity and caution interpretations of other reported functions Nature Plants, 12, 284–293. https://doi.org/10.1038/s41477-025-02187-3

• 2025

  • Jigisha. (2025). An Evolutionary Analysis of Populations of Wheat and Triticale Powdery Mildew in Europe (Dissertation, University of Zurich) https://doi.org/10.5167/uzh-281229
  • Snoeck, S., Zhang, L., Studer, V., Kim, G., Fernández-Fernández, Á. D., Nürnberger, T., & Zipfel, C. (2025). β-sheet stabilization of the island domain underlies ligand-induced LRR-RP activation of plant immune signaling Nature Communications, 16, 10958. https://doi.org/10.1038/s41467-025-66119-7
  • Yue, L., Wang, L., Neuhäuser, B., Zhang, S., Herren, G., Jung, E., Kim, G., Goto, Y., Fernández-Fernández, Á. D., Heuberger, M., Ludewig, U., Zipfel, C., & Keller, B. (2025). Cytoplasmic calcium influx mediated by Lr14a regulates stomatal immunity against leaf rust in wheat Current Biology, 35, 5750-5761.e4. https://doi.org/10.1016/j.cub.2025.10.033
  • Yu, X., Liu, J., Wang, W., Shen, J., Shi, K., Li, J.-F., Ye, J., Rhodes, J., Zipfel, C., Li, C., Li, J., Yan, J., Lu, Y., & Cai, Y. (2025). Plant-derived peptides: From identification to agronomic applications Molecular Plant, 18, 1963–1982. https://doi.org/10.1016/j.molp.2025.11.004
  • Hou, X., Bender, K. W., Fernández-Fernández, Á. D., Kadler, G., Gupta, S., Häfliger, M., Guérin, A., Diet, A., Roffler, S., Campanini, D. A., Wicker, T., Zipfel, C., & Ringli, C. (2025). The Arabidopsis phosphatase PP2C12 negatively regulates LRX-RALF-FER-mediated cell wall integrity sensing The EMBO Journal, 45, 243–260. https://doi.org/10.1038/s44318-025-00614-x
  • Taylor, K., Dixon, R., Taleski, M., Hintzsche, J., Aldiss, Z., Massel, K., Robinson, H., Gagliardini, V., Grossniklaus, U., Godwin, I., Hickey, L., & Djordjevic, M. A. (2025). CEPR1 function across plant lineages: peptide hormone recognition by cereal crop orthologs and developmental roles in barley Journal of Experimental Botany, 76, 5861–5876. https://doi.org/10.1093/jxb/eraf316
  • Zhang, S., Liu, S., Lai, H.-F., Bender, K. W., Kim, G., Caflisch, A., & Zipfel, C. (2025). Author Correction: Reverse engineering of the pattern recognition receptor FLS2 reveals key design principles of broader recognition spectra against evading flg22 epitopes Nature Plants, 11, 2437. https://doi.org/10.1038/s41477-025-02166-8
  • Lintz, J., Goto, Y., Bender, K. W., Bchini, R., Dubrulle, G., Cawston, E., Zipfel, C., Duplessis, S., & Petre, B. (2025). Genetically clustered antifungal phytocytokines and receptor protein family members cooperate to trigger plant immune signaling Journal of Experimental Botany, 76, 4910–4922. https://doi.org/10.1093/jxb/erae297
  • Denic, D. (2025). Unlocking Epigenetic Variation to Breed Sustainable Crops in a Changing Climate (Dissertation, University of Zurich)
  • Siles, J. A., Vera, A., Labouyrie, M., Van Den Hoogen, J., Crowther, T. W., Romero, F., Tedersoo, L., García, C., Jones, A., Panagos, P., van der Heijden, M. G. A., Orgiazzi, A., & Bastida, F. (2025). Land Use Interacts With Climate to Influence Microbial Diversity‐To‐Biomass Ratios Across Europe via Soil Organic Carbon and Nitrogen Molecular Ecology, 34, e17806. https://doi.org/10.1111/mec.17806

Pagination