Publications

ZORA Publication List

Publications

• 2024

  • Hertle, Lukas; Sevim, Semih; Zhu, Jiawei; Pustovalov, Vitaly; Veciana, Andrea; Llacer‐Wintle, Joaquin; Landers, Fabian C; Ye, Hao; Chen, Xiang‐Zhong; Vogler, Hannes; Grossniklaus, Ueli; Puigmartí‐Luis, Josep; Nelson, Bradley J; Pané, Salvador (2024). A Naturally Inspired Extrusion‐Based Microfluidic Approach for Manufacturing Tailorable Magnetic Soft Continuum Microrobotic Devices. Advanced Materials, 36(31):e2402309.
  • Kofler, Xeniya Valeriyivna; Grossniklaus, Ueli; Schiestl, Florian P; Frachon, Léa (2024). Uncovering genes involved in pollinator‐driven mating system shifts and selfing syndrome evolution in Brassica rapa. New Phytologist, 243(3):1220-1230.
  • Russo, Alessia; Alessandrini, Mattia; El Baidouri, Moaine; Frei, Daniel; Galise, Teresa Rosa; Gaidusch, Lara; Oertel, Hannah F; Garcia Morales, Sara E; Potente, Giacomo; Tian, Qin; Smetanin, Dmitry; Bertrand, Joris A M; Onstein, Renske E; Panaud, Olivier; Frey, Jürg E; Cozzolino, Salvatore; Wicker, Thomas; Xu, Shuqing; Grossniklaus, Ueli; Schlüter, Philipp M (2024). Genome of the early spider-orchid Ophrys sphegodes provides insights into sexual deception and pollinator adaptation. Nature Communications, 15(1):6308.
  • Manrique, Silvia; Cavalleri, Alex; Guazzotti, Andrea; Villarino, Gonzalo H; Simonini, Sara; Bombarely, Aureliano; Higashiyama, Tetsuya; Grossniklaus, Ueli; Mizzotti, Chiara; Pereira, Ana Marta; Coimbra, Silvia; Sankaranarayanan, Subramanian; Onelli, Elisabetta; Masiero, Simona; Franks, Robert G; Colombo, Lucia (2024). HISTONE DEACETYLASE19 Controls Ovule Number Determination and Transmitting Tract Differentiation. Plant Physiology, 194(4):2117-2135.
  • Simonini, Sara; Bencivenga, Stefano; Grossniklaus, Ueli (2024). A paternal signal induces endosperm proliferation upon fertilization in Arabidopsis. Science, 383(6683):646-653.

• 2023

  • Moussu, Steven; Lee, Hyun Kyung; Haas, Kalina T; Broyart, Caroline; Rathgeb, Ursina; De Bellis, Damien; Levasseur, Thomas; Schoenaers, Sébastjen; Fernandez, Gorka S; Grossniklaus, Ueli; Bonnin, Estelle; Hosy, Eric; Vissenberg, Kris; Geldner, Niko; Cathala, Bernard; Höfte, Herman; Santiago, Julia (2023). Plant cell wall patterning and expansion mediated by protein-peptide-polysaccharide interaction. Science, 382(6671):719-725.
  • Ojosnegros, Sara; Alvarez, José Manuel; Grossmann, Jonas; Gagliardini, Valeria; Quintanilla, Luis G; Grossniklaus, Ueli; Fernández, Helena (2023). Proteome and Interactome Linked to Metabolism, Genetic Information Processing, and Abiotic Stress in Gametophytes of Two Woodferns. International Journal of Molecular Sciences, 24(15):online.
  • Teano, Gianluca; Concia, Lorenzo; Wolff, Léa; Carron, Léopold; Biocanin, Ivona; Adamusová, Kateřina; Fojtová, Miloslava; Bourge, Michael; Kramdi, Amira; Colot, Vincent; Grossniklaus, Ueli; Bowler, Chris; Baroux, Célia; Carbone, Alessandra; Probst, Aline V; Schrumpfová, Petra Procházková; Fajkus, Jiří; Amiard, Simon; Grob, Stefan; Bourbousse, Clara; Barneche, Fredy (2023). Histone H1 protects telomeric repeats from H3K27me3 invasion in Arabidopsis. Cell Reports, 42(8):112894.
  • Wuest, Samuel E; Schulz, Lukas; Rana, Surbhi; Frommelt, Julia; Ehmig, Merten; Pires, Nuno D; Grossniklaus, Ueli; Hardtke, Christian S; Hammes, Ulrich Z; Schmid, Bernhard; Niklaus, Pascal A (2023). Single-gene resolution of diversity-driven overyielding in plant genotype mixtures. Nature Communications, 14(1):3379.
  • Desnoyer, Nicholas J; Grossniklaus, Ueli (2023). Live Imaging of Arabidopsis Pollen Tube Reception and Double Fertilization Using the Semi-In Vitro Cum Septum Method. Journal of Visualized Experiments (Jove), (192):online.

• 2022

  • Wuest, Samuel E; Pires, Nuno D; Luo, Shan; Vasseur, Francois; Messier, Julie; Grossniklaus, Ueli; Niklaus, Pascal A (2022). Increasing plant group productivity through latent genetic variation for cooperation. PLoS Biology, 20(11):e3001842.
  • Ojosnegros, Sara; Alvarez, José Manuel; Grossmann, Jonas; Gagliardini, Valeria; Quintanilla, Luis G; Grossniklaus, Ueli; Fernández, Helena (2022). The Shared Proteome of the Apomictic Fern Dryopteris affinis ssp. affinis and Its Sexual Relative Dryopteris oreades. International Journal of Molecular Sciences, 23(22):14027.
  • Mecchia, Martin A; Rövekamp, Moritz; Giraldo-Fonseca, Alejandro; Meier, Dario; Gadient, Philippe; Vogler, Hannes; Limacher, Daria; Bowman, John L; Grossniklaus, Ueli (2022). The single Marchantia polymorpha FERONIA homolog reveals an ancestral role in regulating cellular expansion and integrity. Development, 149(19):dev200580.
  • Sakamoto, Takuya; Sakamoto, Yuki; Grob, Stefan; Slane, Daniel; Yamashita, Tomoe; Ito, Nanami; Oko, Yuka; Sugiyama, Tomoya; Higaki, Takumi; Hasezawa, Seiichiro; Tanaka, Maho; Matsui, Akihiro; Seki, Motoaki; Suzuki, Takamasa; Grossniklaus, Ueli; Matsunaga, Sachihiro (2022). Two-step regulation of centromere distribution by condensin II and the nuclear envelope proteins. Nature Plants, 8(8):940-953.
  • Russo, Alessia; Mayjonade, Baptiste; Frei, Daniel; Potente, Giacomo; Kellenberger, Roman T; Frachon, Léa; Copetti, Dario; Studer, Bruno; Frey, Jürg E; Grossniklaus, Ueli; Schlüter, Philipp M (2022). Low-Input High-Molecular-Weight DNA Extraction for Long-Read Sequencing From Plants of Diverse Families. Frontiers in Plant Science, 13:883897.
  • Munglani, Gautam; Vogler, Hannes; Grossniklaus, Ueli (2022). Fast and flexible processing of large FRET image stacks using the FRET-IBRA toolkit. PLoS Computational Biology, 18(4):1009242.
  • Grossniklaus, Ueli. Gentechnikgesetz und wissenschaftliche Logik. In: NZZ, 243, 2 March 2022, 19.
  • Sanchez‐Vera, Victoria; Landberg, Katarina; Lopez‐Obando, Mauricio; Thelander, Mattias; Lagercrantz, Ulf; Muñoz‐Viana, Rafael; Schmidt, Anja; Grossniklaus, Ueli; Sundberg, Eva (2022). The Physcomitrium patens egg cell expresses several distinct epigenetic components and utilizes homologues of BONOBO genes for cell specification. New Phytologist, 233(6):2614-2628.

• 2021

  • Saikia, Eashan; Läubli, Nino F; Vogler, Hannes; Rüggeberg, Markus; Herrmann, Hans J; Burgert, Ingo; Burri, Jan T; Nelson, Bradley J; Grossniklaus, Ueli; Wittel, Falk K (2021). Correction to: Mechanical factors contributing to the Venus flytrap’s rate-dependent response to stimuli. Biomechanics and Modeling in Mechanobiology, 20(6):2299.
  • Sailer, Christian; Tiberi, Simone; Schmid, Bernhard; Stöcklin, Jürg; Grossniklaus, Ueli (2021). Apomixis and genetic background affect distinct traits in Hieracium pilosella L. grown under competition. BMC Biology, 19:177.
  • Saikia, Eashan; Läubli, Nino F; Vogler, Hannes; Rüggeberg, Markus; Herrmann, Hans J; Burgert, Ingo; Burri, Jan T; Nelson, Bradley J; Grossniklaus, Ueli; Wittel, Falk K (2021). Mechanical factors contributing to the Venus flytrap’s rate-dependent response to stimuli. Biomechanics and Modeling in Mechanobiology, 20(6):2287-2297.
  • Fernández, Helena; Grossmann, Jonas; Gagliardini, Valeria; Feito, Isabel; Rivera, Alejandro; Rodríguez, Lucía; Quintanilla, Luis G; Quesada, Víctor; Cañal, María Jesús; Grossniklaus, Ueli (2021). Sexual and Apogamous Species of Woodferns Show Different Protein and Phytohormone Profiles. Frontiers in Plant Science, 12:718932.
  • Florez-Rueda, Ana Marcela; Fiscalini, Flurin; Roth, Morgane; Grossniklaus, Ueli; Städler, Thomas (2021). Endosperm and Seed Transcriptomes Reveal Possible Roles for Small RNA Pathways in Wild Tomato Hybrid Seed Failure. Genome Biology and Evolution, 13(8):evab107.
  • Simonini, Sara; Bemer, Marian; Bencivenga, Stefano; Gagliardini, Valeria; Pires, Nuno D; Desvoyes, Bénédicte; van der Graaff, Eric; Gutierrez, Crisanto; Grossniklaus, Ueli (2021). The Polycomb group protein MEDEA controls cell proliferation and embryonic patterning in Arabidopsis. Developmental Cell, 56(13):1945-1960.e7.
  • Hernandez-Lagana, Elvira; Mosca, Gabriella; Mendocilla-Sato, Ethel; Pires, Nuno; Frey, Anja; Giraldo-Fonseca, Alejandro; Michaud, Caroline; Grossniklaus, Ueli; Hamant, Olivier; Godin, Christophe; Boudaoud, Arezki; Grimanelli, Daniel; Autran, Daphné; Baroux, Célia (2021). Organ geometry channels reproductive cell fate in the Arabidopsis ovule primordium. eLife, 10:e66031.
  • Edited by: Paro, Renato; Grossniklaus, Ueli; Santoro, Raffaella; Wutz, Anton (2021). Cham, Schweiz: Springer Verlag. Introduction to Epigenetics.
  • Läubli, Nino F; Burri, Jan T; Marquard, Julian; Vogler, Hannes; Mosca, Gabriella; Vertti-Quintero, Nadia; Shamsudhin, Naveen; deMello, Andrew; Grossniklaus, Ueli; Ahmed, Daniel; Nelson, Bradley J (2021). 3D mechanical characterization of single cells and small organisms using acoustic manipulation and force microscopy. Nature Communications, 12:2583.

• 2020

  • Saikia, Eashan; Läubli, Nino F; Burri, Jan T; Rüggeberg, Markus; Schlepütz, Christian M; Vogler, Hannes; Burgert, Ingo; Herrmann, Hans J; Nelson, Bradley J; Grossniklaus, Ueli; Wittel, Falk K (2020). Kinematics governing mechanotransduction in the sensory hair of the Venus flytrap. International Journal of Molecular Sciences, 22:280.
  • Sailer, Christian; Stöcklin, Jürg; Grossniklaus, Ueli (2020). Dynamics of apomictic and sexual reproduction during primary succession on a glacier forefield in the Swiss Alps. Scientific Reports, 10:8269.
  • Kartal, Önder; Schmid, Marc W; Grossniklaus, Ueli (2020). Cell type-specific genome scans of DNA methylation divergence indicate an important role for transposable elements. Genome Biology, 21:172.
  • Burri, Jan T; Saikia, Eashan; Läubli, Nino F; Vogler, Hannes; Wittel, Falk K; Rüggeberg, Markus; Herrmann, Hans J; Burgert, Ingo; Nelson, Bradley J; Grossniklaus, Ueli (2020). A single touch can provide sufficient mechanical stimulation to trigger Venus flytrap closure. PLoS Biology, 18(7):e3000740.
  • Tsuchimatsu, Takashi; Kakui, Hiroyuki; Yamazaki, Misako; Marona, Cindy; Tsutsui, Hiroki; Hedhly, Afif; Meng, Dazhe; Sato, Yutaka; Städler, Thomas; Grossniklaus, Ueli; Kanaoka, Masahiro M; Lenhard, Michael; Nordborg, Magnus; Shimizu, Kentaro K (2020). Adaptive Reduction of Male Gamete Number in the Selfing Plant Arabidopsis Thaliana. Nature Communications, 11:2885.
  • Hedhly, Afif; Nestorova, Anna; Herrmann, Anja; Grossniklaus, Ueli (2020). Acute heat stress during stamen development affects both the germline and sporophytic lineages in Arabidopsis thaliana (L.) Heynh. Environmental and Experimental Botany, 173:103992.
  • Moussu, Steven; Broyart, Caroline; Santos-Fernandez, Gorka; Augustin, Sebastian; Wehrle, Sarah; Grossniklaus, Ueli; Santiago, Julia (2020). Structural basis for recognition of RALF peptides by LRX proteins during pollen tube growth. Proceedings of the National Academy of Sciences of the United States of America, 117(13):7494-7503.
  • Wyder, Stefan; Rivera, Alejandro; Valdés, Ana E; Cañal, María Jesús; Gagliardini, Valeria; Fernández, Helena; Grossniklaus, Ueli (2020). Differential gene expression profiling of one- and two-dimensional apogamous gametophytes of the fern Dryopteris affinis ssp. affinis. Plant Physiology and Biochemistry, 148:302-311.
  • Diop, Seydina I; Subotic, Oliver; Giraldo‐Fonseca, Alejandro; Waller, Manuel; Kirbis, Alexander; Neubauer, Anna; Potente, Giacomo; Murray‐Watson, Rachel; Boskovic, Filip; Bont, Zoe; Hock, Zsofia; Payton, Adam C; Duijsings, Daniël; Pirovano, Walter; Conti, Elena; Grossniklaus, Ueli; McDaniel, Stuart F; Szövényi, Péter (2020). A pseudomolecule‐scale genome assembly of the liverwort Marchantia polymorpha. The Plant Journal, 101(6):1378-1396.
  • Burri, Jan T; Munglani, Gautam; Nelson, Bradley J; Grossniklaus, Ueli; Vogler, Hannes (2020). Quantification of mechanical forces and physiological processes involved in pollen tube growth using microfluidics and microrobotics. In: Geitmann, Anja. Pollen and Pollen Tube Biology : Methods and Protocols. Humana, New York: Springer, 275-292.
  • Florez-Rueda, Ana Marcela; Waser, Lucas; Grossniklaus, Ueli (2020). Laser-assisted microdissection of plant embryos for transcriptional profiling. In: Bayer, Martin. Plant Embryogenesis : Methods and Protocols. Humana Press, New York: Springer, 127-139.
  • Vogler, Hannes; Burri, Jan T; Nelson, Bradley J; Grossniklaus, Ueli (2020). Simultaneous measurement of turgor pressure and cell wall elasticity in growing pollen tubes. In: Anderson, Charles T; Haswell, Elizabeth S; Dixit, Ram. Plant cell biology. New York: Elsevier, 297-310.
  • Teano, Gianluca; Concia, Lorenzo; Carron, Léopold; Wolff, Léa; Adamusová, Kateřina; Fojtová, Miloslava; Bourge, Michael; Kramdi, Amira; Colot, Vincent; Grossniklaus, Ueli; Bowler, Chris; Baroux, Célia; Carbone, Alessandra; Probst, Aline V; Procházková Schrumpfová, Petra; Fajkus, Jiří; Amiard, Simon; Grob, Stefan; Bourbousse, Clara; Barneche, Fredy (2020). Histone H1 protects telomeric repeats from H3K27me3 invasion in Arabidopsis. bioRxiv 402172, Cold Spring Harbor Laboratory.
  • Hernandez-Lagana, Elvira; Mosca, Gabriella; Sato, Ethel Mendocilla; Pires, Nuno; Frey, Anja; Giraldo-Fonseca, Alejandro; Grossniklaus, Ueli; Hamant, Olivier; Godin, Christophe; Boudaoud, Arezki; Grimanelli, Daniel; Autran, Daphné; Baroux, Célia (2020). Organ geometry channels cell fate in the Arabidopsis ovule primordium. bioRxiv 226670, Cold Spring Harbor Laboratory.
  • Mecchia, Martin A; Rövekamp, Moritz; Giraldo-Fonseca, Alejandro; Meier, Dario; Gadient, Philippe; Bowman, John L; Grossniklaus, Ueli (2020). Characterization of the single FERONIA homolog in Marchantia polymorpha reveals an ancestral role of CrRLK1L receptor kinases in regulating cell expansion and morphological integrity. bioRxiv 424085, Cold Spring Harbor Laboratory.
  • Simonini, Sara; Bemer, Marian; Bencivenga, Stefano; Gagliardini, Valeria; Pires, Nuno D; Desvoyes, Bénédicte; van der Graaff, Eric; Gutierrez, Crisanto; Grossniklaus, Ueli (2020). The Polycomb group protein MEDEA controls cell proliferation and embryonic patterning in Arabidopsis. bioRxiv 338707, Cold Spring Harbor Laboratory.
  • Deplazes-Zemp, Anna; Grossniklaus, Ueli; Lefort, François; Müller, Pie; Romeis, Jörg; Rüegsegger, Adrian; Schoenenberger, Nicola; Spehn, Eva (2020). Gene drives: benefits, risks, and possible applications. Swiss Academies Factsheet, 15(4):1-7.
  • Grossniklaus, Ueli; Messmer, Monika; Peter, Roland; Romeis, Jörg; Studer, Bruno (2020). Pflanzenzüchtung – von klassischer Kreuzung bis Genom-Editierung. Swiss Academies Factsheet, 15(3):1-5.

• 2019

  • Vogler, Hannes; Santos-Fernandez, Gorka; Mecchia, Martin A; Grossniklaus, Ueli (2019). To preserve or to destroy, that is the question: the role of the cell wall integrity pathway in pollen tube growth. Current Opinion in Plant Biology, 52:131-139.
  • Kuon, Joel-E; Qi, Weihong; Schläpfer, Pascal; Hirsch-Hoffmann, Matthias; von Bieberstein, Philipp Rogalla; Patrignani, Andrea; Poveda, Lucy; Grob, Stefan; Keller, Miyako; Shimizu-Inatsugi, Rie; Grossniklaus, Ueli; Vanderschuren, Hervé; Gruissem, Wilhelm (2019). Haplotype-resolved genomes of geminivirus-resistant and geminivirus-susceptible African cassava cultivars. BMC Biology, 17(1):75.
  • Grob, Stefan; Grossniklaus, Ueli (2019). Invasive DNA elements modify the nuclear architecture of their insertion site by KNOT-linked silencing in Arabidopsis thaliana. Genome Biology, 20(1):120.
  • Wyder, Stefan; Raissig, Michael T; Grossniklaus, Ueli (2019). Consistent Reanalysis of Genome-wide Imprinting Studies in Plants Using Generalized Linear Models Increases Concordance across Datasets. Scientific Reports, 9(1):1320-..
  • Sailer, Christian; Stöcklin, Jürg; Grossniklaus, Ueli (2019). Dynamics of apomictic and sexual reproduction during primary succession on a glacier forefield in the Swiss Alps. bioRxiv 807651, Cold Spring Harbor Laboratory.
  • Kartal, Önder; Schmid, Marc W; Grossniklaus, Ueli (2019). Cell Type-specific Genome Scans of DNA Methylation Diversity Indicate an Important Role for Transposable Elements. bioRxiv 801233, Cold Spring Harbor Laboratory.
  • Burri, Jan T; Saikia, Eashan; Läubli, Nino F; Vogler, Hannes; Wittel, Falk K; Rüggeberg, Markus; Herrmann, Hans J; Burgert, Ingo; Nelson, Bradley J; Grossniklaus, Ueli (2019). The mechanical basis for snapping of the Venus flytrap, Darwin’s ‘most wonderful plant in the world’. bioRxiv 697797, Cold Spring Harbor Laboratory.
  • Moussu, Steven; Broyart, Caroline; Santos-Fernandez, Gorka; Augustin, Sebastian; Wehrle, Sarah; Grossniklaus, Ueli; Santiago, Julia (2019). Structural basis for recognition of RALF peptides by LRX proteins during pollen tube growth. bioRxiv 695874, Cold Spring Harbor Laboratory.
  • Díaz, Mariana; Pečinková, Petra; Nowicka, Anna; Baroux, Célia; Sakamoto, Takuya; Gandha, Priscilla Yuliani; Jeřábková, Hana; Matsunaga, Sachihiro; Grossniklaus, Ueli; Pecinka, Ales (2019). The SMC5/6 Complex Subunit NSE4A Is Involved in DNA Damage Repair and Seed Development. Plant Cell, 31(7):1579-1597.
  • Wuest, Samuel E; Pires, Nuno D; Luo, Shan; Vasseur, Francois; Messier, Julie; Grossniklaus, Ueli; Niklaus, Pascal A (2019). Increasing plant group productivity through latent genetic variation for cooperation. bioRxiv 641449, Cold Spring Harbor Laboratory.
  • Brukhin, Vladimir; Osadtchiy, Jaroslaw V; Florez-Rueda, Ana Marcela; Smetanin, Dmitry; Bakin, Evgeny; Nobre, Margarida Sofia; Grossniklaus, Ueli (2019). The Boechera Genus as a Resource for Apomixis Research. Frontiers in Plant Science:10:392.
  • Burri, Jan T; Vogler, Hannes; Munglani, Gautam; Laubli, Nino F; Grossniklaus, Ueli; Nelson, Bradley J (2019). A Microrobotic System for Simultaneous Measurement of Turgor Pressure and Cell-Wall Elasticity of Individual Growing Plant Cells. IEEE Robotics and Automation Letters, 4(2):641-646.
  • Läubli, Nino F; Shamsudhin, Naveen; Vogler, Hannes; Munglani, Gautam; Grossniklaus, Ueli; Ahmed, Daniel; Nelson, Bradley J (2019). 3D Manipulation and Imaging of Plant Cells using Acoustically Activated Microbubbles. Small Methods, 3(3):1800527.
  • Baroux, Célia; Grossniklaus, Ueli (2019). Seeds—An evolutionary innovation underlying reproductive success in flowering plants. In: Grossniklaus, Ueli. Plant Development and Evolution. Amsterdam: Academic Press, 605-642.
  • Szövényi, Peter; Waller, Manuel; Kirbis, Alexander (2019). Evolution of the plant body plan. In: Grossniklaus, Ueli. Plant development and evolution. Cambridge: Elsevier, 1-34.
  • Edited by: Grossniklaus, Ueli (2019). Amsterdam: Academic Press. Plant Development and Evolution.
  • Florez-Rueda, Ana Marcela; Fiscalini, Flurin; Roth, Morgane; Grossniklaus, Ueli; Städler, Thomas (2019). Endosperm and seed transcriptomes reveal possible roles for small RNA pathways in wild tomato hybrid seed failure. bioRxiv 884387, Cold Spring Harbor Laboratory.

• 2018

  • Kirioukhova, Olga; Shah, Jubin N; Larsen, Danaé S; Tayyab, Muhammad; Mueller, Nora E; Govind, Geetha; Baroux, Célia; Federer, Michael; Gheyselinck, Jacqueline; Barrell, Philippa J; Ma, Hong; Sprunck, Stefanie; Huettel, Bruno; Wallace, Helen; Grossniklaus, Ueli; Johnston, Amal J (2018). Aberrant imprinting may underlie evolution of parthenogenesis. Scientific Reports, 8:10626.
  • Schmid, Marc W; Giraldo-Fonseca, Alejandro; Rövekamp, Moritz; Smetanin, Dmitry; Bowman, John L; Grossniklaus, Ueli (2018). Extensive epigenetic reprogramming during the life cycle of Marchantia polymorpha. Genome Biology, 19(1):9-..
  • Schmid, Marc W; Heichinger, Christian; Coman Schmid, Diana; Guthörl, Daniela; Gagliardini, Valeria; Bruggmann, Rémy; Aluri, Sirisha; Aquino, Catharine; Schmid, Bernhard; Turnbull, Lindsay A; Grossniklaus, Ueli (2018). Contribution of epigenetic variation to adaptation in Arabidopsis. Nature Communications, 9(1):4446.
  • Burri, Jan T; Vogler, Hannes; Läubli, Nino F; Hu, Chengzhi; Grossniklaus, Ueli; Nelson, Bradley J (2018). Feeling the force: how pollen tubes deal with obstacles. New Phytologist, 220(1):187-195.
  • Hedhly, Afif; Vogler, Hannes; Eichenberger, Christof; Grossniklaus, Ueli (2018). Whole-mount Clearing and Staining of Arabidopsis Flower Organs and Siliques. Journal of Visualized Experiments (Jove), (134):online.
  • Kliver, Sergei; Rayko, Mike; Komissarov, Alexey; Bakin, Evgeny; Zhernakova, Daria; Prasad, Kasavajhala; Rushworth, Catherine; Baskar, R; Smetanin, Dmitry; Schmutz, Jeremy; Rokhsar, Daniel S; Mitchell-Olds, Thomas; Grossniklaus, Ueli; Brukhin, Vladimir (2018). Assembly of the Boechera retrofracta Genome and Evolutionary Analysis of Apomixis-Associated Genes. Genes, 9(4):185.
  • Tsuchimatsu, Takashi; Kakui, Hiroyuki; Yamazaki, Misako; Marona, Cindy; Tsutsui, Hiroki; Hedhly, Afif; Meng, Dazhe; Sato, Yutaka; Stadler, Thomas; Grossniklaus, Ueli; Kanaoka, Masahiro M; Lenhard, Michael; Nordborg, Magnus; Shimizu, Kentaro K (2018). Adaptive Reduction of Male Gamete Number in a Selfing Species. bioRxiv 272757, Cold Spring Harbor Laboratory.
  • Ndinyanka Fabrice, Tohnyui; Vogler, Hannes; Draeger, Christian; Munglani, Gautam; Gupta, Shibu; Herger, Aline Galatea; Knox, Paul; Grossniklaus, Ueli; Ringli, Christoph (2018). LRX Proteins play a crucial role in pollen grain and pollen tube cell wall development. Plant Physiology, 176(3):1981-1992.

• 2017

  • Ndinyanka Fabrice, Tohnyui; Kaech, Andres; Barmettler, Gery; Eichenberger, Christof; Knox, J Paul; Grossniklaus, Ueli; Ringli, Christoph (2017). Efficient preparation of Arabidopsis pollen tubes for ultrastructural analysis using chemical and cryo-fixation. BMC Plant Biology, 17:176.
  • Hu, Chengzhi; Zhang, Qi; Meyer, Tobias; Vogler, Hannes; Burri, Jan T; Shamsudhin, Naveen; Grossniklaus, Ueli; Nelson, Bradley J (2017). In vivo tracking and measurement of pollen tube vesicle motion. In: 2017 IEEE International Conference on Robotics and Automation (ICRA), Singapore, 29 May 2017 - 3 June 2017. IEEE, 3575-3580.
  • Grossmann, Jonas; Fernández, Helena; Chaubey, Pururawa M; Valdés, Ana E; Gagliardini, Valeria; Cañal, María J; Russo, Giancarlo; Grossniklaus, Ueli (2017). Proteogenomic analysis greatly expands the identification of proteins related to reproduction in the apogamous fern dryopteris affinis ssp. affinis. Frontiers in Plant Science, 8:336.
  • She, Wenjing; Baroux, Célia; Grossniklaus, Ueli (2017). Cell-type specific chromatin analysis in whole-mount plant tissues by immunostaining. In: Bemer, Marian; Baroux, Célia. Plant Chromatin Dynamics. New York: Springer, 443-454.
  • Pires, Nuno D; Grossniklaus, Ueli (2017). Identification of parent-of-origin-dependent QTLs using bulk-segregant sequencing (Bulk-Seq). In: Bemer, Marian; Baroux, Célia. Plant Chromatin Dynamics. New York: Springer, 361-371.
  • Vogler, Hannes; Grossniklaus, Ueli; Hedhly, Afif (2017). An introduction to male germline development. In: Schmidt, Anja. Plant Germline Development. New York: Springer, 3-15.
  • Vogler, Hannes; Shamsudhin, Naveen; Nelson, Bradley J; Grossniklaus, Ueli (2017). Measuring cytomechanical forces on growing pollen tubes. In: Kovalchuk, I. Pollen tip growth : from biophysical aspects to systems biology. New York: Springer, 65-85.
  • Grob, Stefan; Grossniklaus, Ueli (2017). Chromatin Conformation Capture-Based Analysis of Nuclear Architecture. In: Kovalchuk, I. Plant Epigenetics. Boston, MA: Springer, 15-32.
  • Sasheva, Pavlina; Grossniklaus, Ueli (2017). Differentially methylated region-representational difference analysis (DMR-RDA): a powerful method to identify DMRs in uncharacterized genomes. In: Kovalchuk, I. Plant Epigenetics. Boston, MA: Springer, 113-125.
  • You, Wanhui; Pien, Stéphane; Grossniklaus, Ueli (2017). Chromatin Immunoprecipitation Protocol for Histone Modifications and Protein-DNA binding analyses in arabidopsis. In: Kovalchuk, I. Plant Epigenetics. Boston, MA: Springer, 1-13.
  • Grob, Stefan; Grossniklaus, Ueli (2017). Chromosome conformation capture-based studies reveal novel features of plant nuclear architecture. Current Opinion in Plant Biology, 36:149-157.
  • Mecchia, Martin A; Santos-Fernandez, Gorka; Duss, Nadine N; Somoza, Sofía C; Boisson-Dernier, Aurélien; Gagliardini, Valeria; Martínez-Bernardini, Andrea; Fabrice, Tohnyui Ndinyanka; Ringli, Christoph; Muschietti, Jorge P; Grossniklaus, Ueli (2017). RALF4/19 peptides interact with LRX proteins to control pollen tube growth in Arabidopsis. Science, 358(6370):1600-1603.
  • Grossniklaus, Ueli (2017). Polyspermy produces tri-parental seeds in maize. Current Biology, 27(24):1300-1302.
  • Zhao, Xin’Ai; Bramsiepe, Jonathan; Van Durme, Matthias; Komaki, Shinichiro; Prusicki, Maria Ada; Maruyama, Daisuke; Forner, Joachim; Medzihradszky, Anna; Wijnker, Erik; Harashima, Hirofumi; Lu, You; Schmidt, Anja; Guthörl, Daniela; Logroño, Rosa Sahún; Guan, Yonsheng; Pochon, Gaetan; Grossniklaus, Ueli; Laux, Thomas; Higashiyama, Tetsuya; Lohmann, Jan U; Nowack, Moritz K; Schnittger, Arp (2017). RETINOBLASTOMA RELATED1 mediates germline entry in Arabidopsis. Science, 356:6336.
  • Hu, Chengzhi; Vogler, Hannes; Aellen, Marianne; Shamsudhin, Naveen; Jang, Bumjin; Burri, Jan T; Läubli, Nino; Grossniklaus, Ueli; Pané, Salvador; Nelson, Bradley J (2017). High precision, localized proton gradients and fluxes generated by a microelectrode device induce differential growth behaviors of pollen tubes. Lab on a chip, 17(4):671-680.
  • Hu, Chengzhi; Munglani, Gautam; Vogler, Hannes; Ndinyanka Fabrice, Tohnyui; Shamsudhin, Naveen; Wittel, Falk K; Ringli, Christoph; Grossniklaus, Ueli; Herrmann, Hans J; Nelson, Bradley J (2017). Characterization of size-dependent mechanical properties of tip-growing cells using a lab-on-chip device. Lab on a chip, 17(1):82-90.
  • Baroux, Célia; Pecinka, Ales; Fuchs, Jörg; Kreth, Gregor; Schubert, Ingo; Grossniklaus, Ueli (2017). Non-random chromosome arrangement in triploid endosperm nuclei. Chromosoma, 126(1):115-124.

• 2016

  • Burri, Jan T; Hu, Chengzhi; Shamsudhin, Naveen; Wang, Xueqi; Vogler, Hannes; Grossniklaus, Ueli; Nelson, Bradley J (2016). Dual-axis Cellular Force Microscope for mechanical characterization of living plant cells. In: Automation Science and Engineering (CASE), 2016 IEEE International Conference on, Fort Worth, Texas, 21 August 2016 - 25 August 2016. IEEE Xplore, 942-947.
  • Shamsudhin, Naveen; Atakan, Huseyin Baris; Laubli, Nino; Vogler, Hannes; Hu, Chengzhi; Sebastian, Abu; Grossniklaus, Ueli; Nelson, Bradley J (2016). Probing the micromechanics of the fastest growing plant cell — The pollen tube. In: Engineering in Medicine and Biology Society (EMBC), 2016 IEEE 38th Annual International Conference of the, Lake Buena Vista (Orlando), Florida USA, 16 August 2016 - 20 August 2016. IEEE Xplore, 461-464.
  • Wüst, Samuel E; Philipp, Matthias Anton; Guthörl, Daniela; Schmid, Bernhard; Grossniklaus, Ueli (2016). Seed Production Affects Maternal Growth and Senescence in Arabidopsis. Plant Physiology, 171(1):392-404.
  • Sailer, Christian; Schmid, Bernhard; Grossniklaus, Ueli (2016). Apomixis Allows the Transgenerational Fixation of Phenotypes in Hybrid Plants. Current Biology, 26(3):331-337.
  • Lüthi, C; Romeis, J; Mauch, F; Grossniklaus, U; Studer, B; Kohler, S (2016). Neue Pflanzenzüchtungstechniken für die Schweizer Landwirtschaft – grosses Potenzial, offene Zukunft. Bern: Akademien der Wisschenschaften Schwei / Swiss Academies Factsheets.
  • Vogler, Hannes; Martinez-Bernardini, Andrea; Grossniklaus, Ueli (2016). Maybe she's NOT the boss: male–female crosstalk during sexual plant reproduction. Genome Biology, 17(1):96.
  • Shamsudhin, Naveen; Laeubli, Nino; Atakan, Huseyin Baris; Vogler, Hannes; Hu, Chengzhi; Haeberle, Walter; Sebastian, Abu; Grossniklaus, Ueli; Nelson, Bradley J (2016). Massively Parallelized Pollen Tube Guidance and Mechanical Measurements on a Lab-on-a-Chip Platform. PLoS ONE, 11(12):e0168138.
  • Hedhly, Afif; Vogler, Hannes; Schmid, Marc W; Pazmino, Diana; Gagliardini, Valeria; Santelia, Diana; Grossniklaus, Ueli (2016). Starch Turnover and Metabolism during Flower and Early Embryo Development. Plant Physiology, 172(4):2388-2402.
  • Florez-Rueda, Ana M; Paris, Margot; Schmidt, Anja; Widmer, Alex; Grossniklaus, Ueli; Städler, Thomas (2016). Genomic Imprinting in the Endosperm Is Systematically Perturbed in Abortive Hybrid Tomato Seeds. Molecular Biology and Evolution, 33(11):2935-2946.
  • Khanday, Imtiyaz; Das, Sanjukta; Chongloi, Grace L; Bansal, Manju; Grossniklaus, Ueli; Vijayraghavan, Usha (2016). Genome-Wide Targets Regulated by the OsMADS1 Transcription Factor Reveals Its DNA Recognition Properties. Plant Physiology, 172(1):372-388.
  • Florez Rueda, Ana Marcela; Grossniklaus, Ueli; Schmidt, Anja (2016). Laser-assisted Microdissection (LAM) as a tool for transcriptional profiling of individual cell types. Journal of Visualized Experiments (Jove), 111:online.
  • Rövekamp, Moritz; Bowman, John L; Grossniklaus, Ueli (2016). Marchantia MpRKD Regulates the Gametophyte-Sporophyte Transition by Keeping Egg Cells Quiescent in the Absence of Fertilization. Current Biology, 26(13):1782-1789.
  • Müller, Lena M; Lindner, Heike; Pires, Nuno D; Gagliardini, Valeria; Grossniklaus, Ueli (2016). A subunit of the oligosaccharyltransferase complex is required for interspecific gametophyte recognition in Arabidopsis. Nature Communications, 7:10826.
  • Pires, Nuno D; Bemer, Marian; Müller, Lena M; Baroux, Célia; Spillane, Charles; Grossniklaus, Ueli (2016). Quantitative genetics identifies cryptic genetic variation involved in the paternal regulation of seed development. PLoS Genetics, 12(1):e1005806.
  • Sedeek, Khalid E M; Whittle, Edward; Guthörl, Daniela; Grossniklaus, Ueli; Shanklin, John; Schlüter, Philipp M (2016). Amino acid change in an Orchid desaturase enables mimicry of the pollinator’s sex pheromone. Current Biology, 26(11):1505-1511.

• 2015

  • Boisson-Dernier, Aurélien; Franck, Christina Maria; Lituiev, Dmytro S; Grossniklaus, Ueli (2015). Receptor-like cytoplasmic kinase MARIS functions downstream of CrRLK1L-dependent signaling during tip growth. Proceedings of the National Academy of Sciences of the United States of America, 112(39):12211-12216.
  • Singh, Amit Kumar; Bashir, Tufail; Sailer, Christian; Gurumoorthy, Viswanathan; Ramakrishnan, Anantha Maharasi; Dhanapal, Shanmuhapreya; Grossniklaus, Ueli; Baskar, Ramamurthy (2015). Parental age affects somatic mutation rates in the progeny of flowering plants. Plant Physiology, 168(1):247-257.
  • Lindner, Heike; Kessler, Sharon A; Müller, Lena M; Shimosato-Asano, Hiroko; Boisson-Dernier, Aurélien; Grossniklaus, Ueli (2015). TURAN and EVAN mediate pollen tube reception in Arabidopsis Synergids through protein glycosylation. PLoS Biology, 13(4):e1002139.
  • Schmidt, Anja; Schmid, Marc W; Grossniklaus, Ueli (2015). Plant germline formation: common concepts and developmental flexibility in sexual and asexual reproduction. Development, 142(2):229-241.
  • Vogler, Hannes; Felekis, Dimitrios; Nelson, Bradley; Grossniklaus, Ueli (2015). Measuring the mechanical properties of plant cell walls. Plants, 4(2):167-182.
  • Felekis, D; Vogler, H; Mecja, G; Muntwyler, S; Nestorova, A; Huang, T; Sakar, M S; Grossniklaus, U; Nelson, B J (2015). Real-time automated characterization of 3D morphology and mechanics of developing plant cells. International Journal of Robotics Research, 34(8):1136-1146.
  • Schmid, Marc W; Grob, Stefan; Grossniklaus, Ueli (2015). HiCdat: a fast and easy-to-use Hi-C data analysis tool. BMC Bioinformatics, 16:277.
  • Schmid, Marc W; Schmidt, Anja; Grossniklaus, Ueli (2015). The female gametophyte: an emerging model for cell type-specific systems biology in plant development. Frontiers in Plant Science, 6:907.
  • Schmid, Marc W; Grossniklaus, Ueli (2015). Rcount: simple and flexible RNA-Seq read counting. Bioinformatics, 31(3):436-437.

• 2014

  • Kessler, S A; Lindner, H; Jones, D S; Grossniklaus, U (2014). Functional analysis of related CrRLK1L receptor-like kinases in pollen tube reception. EMBO Reports, 16(1):107-115.
  • Grossniklaus, Ueli; Paro, Renato (2014). Transcriptional silencing by polycomb-group proteins. Cold Spring Harbor Perspectives in Biology, 6(11):a019331.
  • Grob, Stefan; Schmid, Marc W; Grossniklaus, Ueli (2014). Hi-C analysis in Arabidopsis identifies the KNOT, a structure with similarities to the flamenco locus of Drosophila. Molecular Cell, 55(5):678-693.
  • Schmidt, Anja; Schmid, Marc W; Klostermeier, Ulrich C; Qi, Weihong; Guthörl, Daniela; Sailer, Christian; Waller, Manuel; Rosenstiel, Philip; Grossniklaus, Ueli (2014). Apomictic and sexual germline development differ with respect to cell cycle, transcriptional, hormonal and epigenetic regulation. PLoS Genetics, 10(7):e1004476.
  • Ngo, Quy A; Vogler, Hannes; Lituiev, Dmytro S; Nestorova, Anna; Grossniklaus, Ueli (2014). A calcium dialog mediated by the FERONIA Signal transduction pathway controls plant sperm delivery. Developmental Cell, 29(4):491-500.
  • Lituiev, Dmytro S; Grossniklaus, Ueli (2014). Patterning of the angiosperm female gametophyte through the prism of theoretical paradigms. Biochemical Society Transactions, 42(2):332-339.
  • Bashir, T; Sailer, C; Gerber, F; Loganathan, N; Bhoopalan, H; Eichenberger, C; Grossniklaus, U (2014). Hybridization alters spontaneous mutation rates in a parent-of-origin-dependent fashion in Arabidopsis. Plant Physiology, 165(1):424-437.
  • Felekis, D; Vogler, H; Grossniklaus, U; Nelson, Bradley J (2014). In Emerging Tools for Micro and Nano Manipulation. In: Felekis, D; Vogler, H; Grossniklaus, Grossniklaus; Nelson, Bradley J. Microrobotic tools for plant biology. s.n.: Wiley-VCH, n/a.
  • Pires, Nuno D; Grossniklaus, Ueli (2014). Different yet similar: evolution of imprinting in flowering plants and mammals. F1000 Prime Reports, 6:63.
  • Sailer, Christian; Schmid, Bernhard; Stöcklin, Jürg; Grossniklaus, Ueli (2014). Sexual Hieracium pilosella plants are better inter-specific, while apomictic plants are better intra-specific competitors. Perspectives in Plant Ecology, Evolution and Systematics, 16(2):43-51.
  • Wuest, Samuel E; Grossniklaus, Ueli (2014). Laser-assisted microdissection applied to floral tissues. In: Riechmann, José Luis; Wellmer, Frank. Methods in Molecular Biology: Flower Development. New York, Heidelberg, Dordrecht, London: Springer, 329-344.
  • Gossmann, Toni I; Schmid, Marc W; Grossniklaus, Ueli; Schmid, Karl J (2014). Selection-driven evolution of sex-biased genes is consistent with sexual selection in arabidopsis thaliana. Molecular Biology and Evolution, 31(3):574-583.

• 2013

  • Braun, R; Grossniklaus, U; Gygax, D; Kohler, S; Matthias, P; Romeis, J; Sanvido, O; Stieger, P (2013). Gentechnisch veränderte Nutzpflanzen und ihre Bedeutung für eine nachhaltige Landwirtschaft in der Schweiz. Bern: Akademien der Wissenschaften Schweiz.
  • Hirsch, S; Baumberger, R; Grossniklaus, U (2013). Epigenetic variation, inheritance, and selection in plant populations. Cold Spring Harbor Symposia on Quantitative Biology, 77:97-104.
  • Barrell, Philippa; Grossniklaus, Ueli (2013). Examining female meiocytes of maize by confocal microscopy. In: Pawlowski, Wojciech. Plant Meiosis: Methods and Protocols , Methods in Molecular Biology. Springer, 45-52.
  • Baroux, Célia; Autran, Daphné; Raissig, Michael T; Grimanelli, Daniel; Grossniklaus, Ueli (2013). Parental contributions to the transcriptome of early plant embryos. Current Opinion in Genetics & Development, 23(1):72-74.
  • Ngo, Quy A; Albrecht, Huguette; Tsuchimatsu, Takashi; Grossniklaus, Ueli (2013). The differentially regulated genes TvQR1 and TvPirin of the parasitic plant Triphysaria exhibit distinctive natural allelic diversity. BMC Plant Biology, 13:28.
  • Grossniklaus, Ueli; Kelly, William G; Kelly, Bill; Ferguson-Smith, Anne C; Pembrey, Marcus; Lindquist, Susan (2013). Transgenerational epigenetic inheritance: how important is it?. Nature Reviews. Genetics, 14(3):228-235.
  • Raissig, Michael T; Gagliardini, Valeria; Jaenisch, Johan; Grossniklaus, Ueli; Baroux, Célia (2013). Efficient and rapid isolation of early-stage embryos from Arabidopsis thaliana seeds. Journal of Visualized Experiments, (76):e50371.
  • Lindner, Matias; Simonini, Sara; Kooiker, Maarten; Gagliardini, Valeria; Somssich, Marc; Hohenstatt, Mareike; Simon, Rüdiger; Grossniklaus, Ueli; Kater, Martin M (2013). TAF13 interacts with PRC2 members and is essential for Arabidopsis seed development. Developmental Biology, 379(1):28-37.
  • Grob, Stefan; Schmid, Marc W; Luedtke, Nathan W; Wicker, Thomas; Grossniklaus, Ueli (2013). Characterization of chromosomal architecture in Arabidopsis by chromosome conformation capture. Genome Biology, 14:R129.
  • Raissig, Michael T; Bemer, Marian; Baroux, Célia; Grossniklaus, Ueli (2013). Genomic imprinting in the Arabidopsis embryo is partly regulated by PRC2. PLoS Genetics, 9(12):e1003862.
  • Lituiev, Dmytro S; Krohn, Nádia G; Müller, Bruno; Jackson, David; Hellriegel, Barbara; Dresselhaus, Thomas; Grossniklaus, Ueli (2013). Theoretical and experimental evidence indicates that there is no detectable auxin gradient in the angiosperm female gametophyte. Development, 140(22):4544-4553.
  • Boisson-Dernier, Aurélien; Lituiev, Dmytro S; Nestorova, Anna; Franck, Christina Maria; Thirugnanarajah, Sharme; Grossniklaus, Ueli (2013). ANXUR receptor-like kinases coordinate cell wall integrity with growth at the pollen tube tip via NADPH oxidases. PLoS Biology, 11(11):e1001719.
  • Sedeek, Khalid E M; Qi, Weihong; Schauer, Monica A; Gupta, Alok K; Poveda, Lucy; Xu, Shuqing; Liu, Zhong-Jian; Grossniklaus, Ueli; Schiestl, Florian P; Schlüter, Philipp M (2013). Transcriptome and proteome data reveal candidate genes for pollinator attraction in sexually deceptive Orchids. PLoS ONE, 8(5):e64621.
  • Vogler, Hannes; Draeger, Christian; Weber, Alain; Felekis, Dimitris; Eichenberger, Christof; Routier-Kierzkowska, Anne-Lise; Boisson-Dernier, Aurélien; Ringli, Christoph; Nelson, Bradley J; Smith, Richard S; Grossniklaus, Ueli (2013). The pollen tube: a soft shell with a hard core. The Plant Journal, 73(4):617-627.
  • Wuest, Samuel E; Schmid, Marc W; Grossniklaus, Ueli (2013). Cell-specific expression profiling of rare cell types as exemplified by its impact on our understanding of female gametophyte development. Current Opinion in Plant Biology, 16(1):41-49.
  • Schmidt, Anja; Wöhrmann, Heike J P; Raissig, Michael T; Arand, Julia; Gheyselinck, Jacqueline; Gagliardini, Valeria; Heichinger, Christian; Walter, Joern; Grossniklaus, Ueli (2013). The Polycomb group protein MEDEA and the DNA methyltransferase MET1 interact in Arabidopsis to repress autonomous endosperm development. The Plant Journal, 73(5):776-787.

• 2012

  • Wöhrmann, Heike J P; Gagliardini, Valeria; Raissig, Michael T; Wehrle, Wendelin; Arand, Julia; Schmidt, Anja; Tierling, Sascha; Page, Damian R; Schöb, Hanspeter; Walter, Jörn; Grossniklaus, Ueli (2012). Identification of a DNA methylation-independent imprinting control region at the Arabidopsis MEDEA locus. Genes and Development, 26(16):1837-1850.
  • Schmid, Marc W; Schmidt, Anja; Klostermeier, Ulrich C; Barann, Matthias; Rosenstiel, Philip; Grossniklaus, Ueli (2012). A powerful method for transcriptional profiling of specific cell types in eukaryotes: laser-assisted microdissection and RNA sequencing. PLoS ONE, 7(1):e29685.
  • Petricka, Jalean J; Schauer, Monica A; Megraw, Molly; Breakfield, Natalie W; Thompson, J Will; Georgiev, Stoyan; Soderblom, Erik J; Ohler, Uwe; Moseley, Martin Arthur; Grossniklaus, Ueli; Benfey, Philip N (2012). The protein expression landscape of the Arabidopsis root. Proceedings of the National Academy of Sciences of the United States of America, 109(18):6811-6818.
  • Schmidt, Anja; Schmid, Marc W; Grossniklaus, Ueli (2012). Analysis of plant germline development by high-throughput RNA profiling: technical advances and new insights. The Plant Journal, 70(1):18-29.
  • You, Wanhui; Tyczewska, Agata; Spencer, Matthew; Daxinger, Lucia; Schmid, Marc W; Grossniklaus, Ueli; Simon, Stacey A; Meyers, Blake C; Matzke, Antonius J M; Matzke, Marjori (2012). Atypical DNA methylation of genes encoding cysteine-rich peptides in Arabidopsis thaliana. BMC Plant Biology, 12:51.
  • Marshall, Alex; Aalen, Reidunn B; Audenaert, Dominique; Beeckman, Tom; Broadley, Martin R; Butenko, Melinka A; Caño-Delgado, Ana I; de Vries, Sacco; Dresselhaus, Thomas; Felix, Georg; Graham, Neil S; Foulkes, John; Granier, Christine; Greb, Thomas; Grossniklaus, Ueli; Hammond, John P; Heidstra, Renze; Hodgman, Charlie; Hothorn, Michael; Inzé, Dirk; Ostergaard, Lars; Russinova, Eugenia; Simon, Rüdiger; Skirycz, Aleksandra; Stahl, Yvonne; Zipfel, Cyril; De Smet, Ive (2012). Tackling drought stress: receptor-like kinases present new approaches. Plant Cell, 24(6):2262-2278.
  • Leshem, Yehoram; Johnson, Cameron; Wuest, Samuel E; Song, Xiaoya; Ngo, Quy A; Grossniklaus, Ueli; Sundaresan, Venkatesan (2012). Molecular characterization of the glauce mutant: a central cell-specific function is required for double fertilization in Arabidopsis. Plant Cell, 24(8):3264-3277.
  • Lindner, Heike; Müller, Lena Maria; Boisson-Dernier, Aurélien; Grossniklaus, Ueli (2012). CrRLK1L receptor-like kinases: not just another brick in the wall. Current Opinion in Plant Biology, 15(6):659-669.
  • Pires, Nuno D; Grossniklaus, Ueli (2012). How to fine-tune an epigenetic switch. Developmental Cell, 23(3):453-454.
  • Kritsas, Konstantinos; Wuest, Samuel E; Hupalo, Daniel; Kern, Andrew D; Wicker, Thomas; Grossniklaus, Ueli (2012). Computational analysis and characterization of UCE-like elements (ULEs) in plant genomes. Genome Research, 22(12):2455-2466.
  • Ngo, Quy A; Baroux, Celia; Guthörl, Daniela; Mozerov, Peter; Collinge, Margaret A; Sundaresan, Venkatesan; Grossniklaus, Ueli (2012). The Armadillo repeat gene ZAK IXIK promotes Arabidopsis early embryo and endosperm development through a distinctive gametophytic maternal effect. Plant Cell, 24(10):4026-4043.
  • Iwano, Megumi; Ngo, Quy A; Entani, Tetsuyuki; Shiba, Hiroshi; Nagai, Takeharu; Miyawaki, Atsushi; Isogai, Akira; Grossniklaus, Ueli; Takayama, Seiji (2012). Cytoplasmic Ca2+ changes dynamically during the interaction of the pollen tube with synergid cells. Development, 139(22):4202-4209.
  • Sprunck, Stefanie; Rademacher, Svenja; Vogler, Frank; Gheyselinck, Jacqueline; Grossniklaus, Ueli; Dresselhaus, Thomas (2012). Egg cell-secreted EC1 triggers sperm cell activation during double fertilization. Science, 338(6110):1093-1097.
  • Mayank, Pururawa; Grossman, Jonas; Wuest, Samuel; Boisson-Dernier, Aurélien; Roschitzki, Bernd; Nanni, Paolo; Nühse, Thomas; Grossniklaus, Ueli (2012). Characterization of the phosphoproteome of mature Arabidopsis pollen. The Plant Journal, 72(1):89-101.
  • Züst, Tobias; Heichinger, Christian; Grossniklaus, Ueli; Harrington, Richard; Kliebenstein, Daniel J; Turnbull, Lindsay A (2012). Natural enemies drive geographic variation in plant defenses. Science, 338(6103):116-119.
  • Bemer, Marian; Grossniklaus, Ueli (2012). Dynamic regulation of Polycomb group activity during plant development. Current Opinion in Plant Biology, 15(5):523-529.
  • Lindner, Heike; Raissig, Michael T; Sailer, Christian; Shimosato-Asano, Hiroko; Bruggmann, Rémy; Grossniklaus, Ueli (2012). SNP-Ratio Mapping (SRM): identifying lethal alleles and mutations in complex genetic backgrounds by next-generation sequencing. Genetics, 191(4):1381-1386.
  • Xu, Shuqing; Schlüter, Philipp M; Grossniklaus, Ueli; Schiestl, Florian P (2012). The genetic basis of pollinator adaptation in a sexually deceptive orchid. PLoS Genetics, 8(8):e1002889.
  • Jones, A M E; Aebersold, R; Ahrens, C H; Apweiler, R; Baerenfaller, K; Baker, M; Bendixen, E; Briggs, S; Brownridge, P; Brunner, E; Daube, M; Deutsch, E W; Grossniklaus, U; Heazlewood, J L; Hengartner, M O; Hermjakob, H; Jovanovic, M; Lawless, C; Lochnit, G; Martens, L; Ravnsborg, C; Schrimpf, S P; Shim, Y H; Subasic, D; Tholey, A; van Wijk, K; von Mering, C; Weiss, M; Zheng, X (2012). The HUPO initiative on Model Organism Proteomes, iMOP. Proteomics, 12(3):340-345.

• 2011

  • Dumbliauskas, E; Lechner, E; Jaciubek, M; Berr, A; Pazhouhandeh, M; Alioua, M; Cognat, V; Brukhin, V; Koncz, C; Grossniklaus, U; Molinier, J; Genschik, P (2011). The Arabidopsis CUL4-DDB1 complex interacts with MSI1 and is required to maintain MEDEA parental imprinting. The EMBO Journal, 30(4):731-743.
  • Boisson-Dernier, A; Kessler, S A; Grossniklaus, U (2011). The walls have ears: the role of plant CrRLK1Ls in sensing and transducing extracellular signals. Journal of Experimental Botany, 62(5):1581-1591.
  • Raissig, M T; Baroux, C; Grossniklaus, U (2011). Regulation and flexibility of genomic imprinting during seed development. Plant Cell, 23(1):16-26.
  • Baroux, C; Raissig, M T; Grossniklaus, U (2011). Epigenetic regulation and reprogramming during gamete formation in plants. Current Opinion in Genetics & Development, 21(2):124-133.
  • Paszkowski, J; Grossniklaus, U (2011). Selected aspects of transgenerational epigenetic inheritance and resetting in plants. Current Opinion in Plant Biology, 14(2):195-203.
  • Brukhin, V B; Jaciubek, M; Bolaños Carpio, A; Kuzmina, V; Grossniklaus, U (2011). Female gametophytic mutants of Arabidopsis thaliana identified in a gene trap insertional mutagenesis screen. International Journal of Developmental Biology, 55(1):73-84.
  • Koszegi, D; Johnston, A J; Rutten, T; Czihal, A; Altschmied, L; Kumlehn, J; Wüst, S E J; Kirioukhova, O; Gheyselinck, J; Grossniklaus, U; Bäumlein, H (2011). Members of the RKD transcription factor family induce an egg cell-like gene expression program. Plant Journal, 67(2):280-291.
  • Grossniklaus, U (2011). Plant germline development: a tale of cross-talk, signaling, and cellular interactions. Sexual Plant Reproduction, 24(2):91-95.
  • Autran, D; Baroux, C; Raissig, M T; Lenormand, T; Wittig, M; Grob, S; Steimer, A; Barann, M; Klostermeier, U C; Leblanc, O; Vielle-Calzada, J P; Rosenstiel, P; Grimanelli, D; Grossniklaus, U (2011). Maternal epigenetic pathways control parental contributions to Arabidopsis early embryogenesis. Cell, 145(5):707-719.
  • Kirioukhova, O; Johnston, A J; Kleen, D; Kägi, C; Baskar, R; Moore, J M; Bäumlein, H; Gross-Hardt, R; Grossniklaus, U (2011). Female gametophytic cell specification and seed development require the function of the putative Arabidopsis INCENP ortholog WYRD. Development, 138(16):3409-3420.
  • McKeown, P C; Laouielle-Duprat, S; Prins, P; Wolff, P; Schmid, M W; Donoghue, M T A; Fort, A; Duszynska, D; Comte, A; Lao, N T; Wennblom, T J; Smant, G; Köhler, C; Grossniklaus, U; Spillane, C (2011). Identification of imprinted genes subject to parent-of-origin specific expression in Arabidopsis thaliana seeds. BMC Plant Biology, 11:113.
  • Kessler, S A; Grossniklaus, U (2011). She's the boss: signaling in pollen tube reception. Current Opinion in Plant Biology, 14(5):622-627.
  • Schmidt, A; Wuest, S E; Vijverberg, K; Baroux, C; Kleen, D; Grossniklaus, U (2011). Transcriptome analysis of the Arabidopsis megaspore mother cell uncovers the importance of RNA helicases for plant germline development. PLoS Biology, 9(9):e1001155.
  • Schlüter, P M; Xu, S; Gagliardini, V; Whittle, E; Shanklin, J; Grossniklaus, U; Schiestl, F P (2011). Stearoyl-acyl carrier protein desaturases are associated with floral isolation in sexually deceptive orchids. Proceedings of the National Academy of Sciences of the United States of America (PNAS), 108(14):5696-5701.

• 2010

  • Aquea, F; Johnston, A J; Cañon, P; Grossniklaus, U; Arce-Johnson, P (2010). TRAUCO, a Trithorax-group gene homologue, is required for early embryogenesis in Arabidopsis thaliana. Journal of Experimental Botany, 61(4):1215-1224.
  • Pillot, M; Baroux, C; Vazquez, M A; Autran, D; Leblanc, O; Vielle-Calzada, J P; Grossniklaus, U; Grimanelli, D (2010). Embryo and endosperm inherit distinct chromatin and transcriptional states from the female gametes in Arabidopsis. The Plant Cell, 22(2):307-320.
  • Pien, S; Grossniklaus, U (2010). Chromatin immunoprecipitation protocol for histone modifications and protein-DNA binding analyses in Arabidopsis. Methods in Molecular Biology, 631:209-220.
  • Matias-Hernandez, L; Battaglia, R; Galbiati, F; Rubes, M; Eichenberger, C; Grossniklaus, U; Kater, M M; Colombo, L (2010). VERDANDI is a direct target of the MADS domain ovule identity complex and affects embryo sac differentiation in Arabidopsis. The Plant Cell, 22(6):1702-1715.
  • Johnston, A J; Kirioukhova, O; Barrell, P J; Rutten, T; Moore, J M; Baskar, R; Grossniklaus, U; Gruissem, W (2010). Dosage-sensitive function of retinoblastoma related and convergent epigenetic control are required during the Arabidopsis life cycle. PLoS Genetics, 6(6):e1000988.
  • Müller, B; Grossniklaus, U (2010). Model organisms--A historical perspective. Journal of Proteomics, 73(11):2054-2063.
  • Keinath, N F; Kierszniowska, S; Lorek, J; Bourdais, G; Kessler, S A; Shimosato-Asano, H; Grossniklaus, U; Schulze, W X; Robatzek, S; Panstruga, R (2010). PAMP (pathogen-associated molecular pattern)-induced changes in plasma membrane compartmentalization reveal novel components of plant immunity. The Journal of Biological Chemistry, 285(50):39140-39149.
  • Kessler, S A; Shimosato-Asano, H; Keinath, N F; Wuest, S E; Ingram, G; Panstruga, R; Grossniklaus, U (2010). Conserved molecular components for pollen tube reception and fungal invasion. Science, 330(6006):968-971.
  • Fakheran, S; Paul-Victor, C; Heichinger, C; Schmid, B; Grossniklaus, U; Turnbull, L A (2010). Adaptation and extinction in experimentally fragmented landscapes. Proceedings of the National Academy of Sciences of the United States of America (PNAS), 107(44):19120-19125.
  • Wuest, S E; Vijverberg, K; Schmidt, A; Weiss, M; Gheyselinck, J; Lohr, M; Wellmer, F; Rahnenführer, J; von Mering, C; Grossniklaus, U (2010). Arabidopsis female gametophyte gene expression map reveals similarities between plant and animal gametes. Current Biology, 20(6):506-512.

• 2009

  • Schauer, S E; Schlüter, P M; Baskar, R; Gheyselinck, J; Bolaños, A; Curtis, M D; Grossniklaus, U (2009). Intronic regulatory elements determine the divergent expression patterns of AGAMOUS-LIKE6 subfamily members in Arabidopsis. The Plant Journal, 59(6):987-1000.
  • Boisson-Dernier, A; Roy, S; Kritsas, K; Grobei, M A; Jaciubek, M; Schroeder, J I; Grossniklaus, U (2009). Disruption of the pollen-expressed FERONIA homologs ANXUR1 and ANXUR2 triggers pollen tube discharge. Development, 136(19):3279-3288.
  • Grossniklaus, U (2009). Plant science: Paternal patterning cue. Science, 323(5920):1439-1440.
  • Grobei, M A; Qeli, E; Brunner, E; Rehrauer, H; Zhang, R; Roschitzki, B; Basler, K; Ahrens, C H; Grossniklaus, U (2009). Deterministic protein inference for shotgun proteomics data provides new insights into Arabidopsis pollen development and function. Genome Research, 19(10):1786-1800.

• 2008

  • Moll, C; von Lyncker, L; Zimmermann, S; Kägi, C; Baumann, N; Twell, D; Grossniklaus, U; Gross-Hardt, R (2008). CLO/GFA1 and ATO are novel regulators of gametic cell fate in plants. The Plant Journal, 56(6):913-921.
  • Guggisberg, A; Baroux, C; Grossniklaus, U; Conti, E (2008). Genomic origin and organization of the allopolyploid Primula egaliksensis investigated by in situ hybridization. Annals of Botany, 101(7):919-927.
  • Curtis, Mark Douglas; Grossniklaus, Ueli (2008). Molecular control of autonomous embryo and endosperm development. Sexual Plant Reproduction, 21(1):79-88.
  • Pien, S; Fleury, D; Mylne, J S; Crevillen, P; Inzé, D; Avramova, Z; Dean, C; Grossniklaus, U (2008). ARABIDOPSIS TRITHORAX1 dynamically regulates FLOWERING LOCUS C activation via histone 3 lysine 4 trimethylation. Plant Cell, 20(3):580-588.
  • Baroux, C; Autran, D; Gillmor, C S; Grimanelli, D; Grossniklaus, U (2008). The maternal to zygotic transition in animals and plants. Cold Spring Harbor Symposia on Quantitative Biology, 73:89-100.
  • Evans, M M S; Grossniklaus, U (2008). The Maize megagametophyte. In: Bennetzen, J; Hake, S. Handbook of Maize: Its Biology. New York, N.Y., US: Springer, 79-104.
  • Baerenfaller, K; Grossmann, J; Grobei, M A; Hull, R; Hirsch-Hoffmann, M; Yalovsky, S; Zimmermann, P; Grossniklaus, U; Gruissem, W; Baginsky, S (2008). Genome-scale proteomics reveals Arabidopsis thaliana gene models and proteome dynamics. Science, 320(5878):938-941.
  • Bemer, M; Wolters-Arts, M; Grossniklaus, U; Angenent, G C (2008). The MADS domain protein DIANA acts together with AGAMOUS-LIKE80 to specify the central cell in Arabidopsis ovules. Plant Cell, 20(8):2088-2101.
  • Johnston, A J; Matveeva, E; Kirioukhova, O; Grossniklaus, U; Gruissem, W (2008). A dynamic reciprocal RBR-PRC2 regulatory circuit controls Arabidopsis gametophyte development. Current Biology, 18(21):1680-1686.

• 2007

  • Escobar-Restrepo, J-M; Huck, N; Kessler, S; Gagliardini, V; Gheyselinck, J; Yang, W-C; Grossniklaus, U (2007). The FERONIA Receptor-like Kinase Mediates Male-Female Interactions During Pollen Tube Reception. Science, 317(5838):656-660.

• 2006

  • da Costa-Nunes, J A; Bhatt, A M; O'Shea, S; West, C E; Bray, C M; Grossniklaus, U; Dickinson, H G (2006). Characterization of the three Arabidopsis thaliana RAD21 cohesins reveals differential responses to ionizing radiation. Journal of Experimental Botany, 57(4):971-983.

• 2004

  • Baroux, Célia; Fransz, Paul; Grossniklaus, Ueli (2004). Nuclear fusions contribute to polyploidization of the gigantic nuclei in the chalazal endosperm of Arabidopsis. Planta, 220(1):38-46.
  • Bernasconi, G; Ashman, T-L; Birkhead, T R; Bishop, J D D; Grossniklaus, U; Kubli, E; Marshall, D L; Schmid, B; Skogsmyr, I; Snook, R R; Taylor, D; Till-Bottraud, I; Ward, Paul I; Zeh, D W; Hellriegel, B (2004). Evolutionary ecology of the prezygotic stage.. Science, 303(5660):971-975.

• 2003

  • Huck, N; Moore, J M; Federer, Michael; Grossniklaus, U (2003). The Arabidopsis mutant feronia disrupts the female gametophytic control of pollen tube reception. Development, 130(10):2149-2159.
  • da Costa-Nunes, J A; Grossniklaus, U (2003). Unveiling the gene-expression profile of pollen. Genome Biology, 5:205.

Pagination